Computer Documentation Wiki

User Tools

Site Tools

Trace: • fedora_39 • termnal_server • fedora_37 • aips • mfa_easier • 2fa-introduction
eso_pipelines

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision		Previous revision
eso_pipelines [2025/04/04 13:48] – janseneso_pipelines [2025/04/11 13:54] (current) – jansen
Line 23: Line 23:
   apptainer exec /software/eso/pipelines.sif [command]   apptainer exec /software/eso/pipelines.sif [command]
 e.g. e.g.
-  apptainer exec /software/eso/pipelines.sifesoreflex molecfit+  apptainer exec /software/eso/pipelines.sif esoreflex molecfit
  
 The apptainer always makes the current directory and the user's home available to commands running inside it. If you need access to data in other directories, these can be ''bound'' to the apptainer to make them available: The apptainer always makes the current directory and the user's home available to commands running inside it. If you need access to data in other directories, these can be ''bound'' to the apptainer to make them available:
-  apptainer exec --bind /my/data/dir:/data /software/eso/pipelines.sif esoreflex gravity +  apptainer exec --bind /my/data/dir:/data /software/eso/pipelines.sif esoreflex 
-This binds ''/my/data/dir'' on the real system to a path ''/data'' inside the apptainer.+This binds ''/my/data/dir'' on the real system to a path ''/data'' inside the apptainer. Or: 
 +  apptainer exec --bind /almastorage /software/eso/pipelines.sif esoreflex 
 +to make all of the disk ''/almastorage'' visible in the container, under that same name (of course the app will still only have access to data where the user has access). 
  
 ESO's site about apptainer has some more information about usage and options, see [[https://www.eso.org/sci/software/apptainer.html]] (skip the part about installation if you run on Sterrewacht workstations, that has already been done for you) ESO's site about apptainer has some more information about usage and options, see [[https://www.eso.org/sci/software/apptainer.html]] (skip the part about installation if you run on Sterrewacht workstations, that has already been done for you)
Line 39: Line 42:
 | nirps | sinfo | spher | uves|  | nirps | sinfo | spher | uves| 
 | vcam| vimos | visir | xshoo | | vcam| vimos | visir | xshoo |
 +Refer to the ESO documentation about startup methods, options, required parameters etc.
eso_pipelines.1743774505.txt.gz · Last modified: by jansen

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
CC Attribution-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki